PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu045994.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 316aa    MW: 36008 Da    PI: 10.3533
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu045994.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81.1e-171863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W++Ia+++  gR++k+c++rw++ 
      Oeu045994.1 18 RGHWRPSEDEKLQQLVEQYGPQNWNSIAEKLR-GRSGKSCRLRWFNQ 63
                     899*****************************.***********996 PP
2Myb_DNA-binding53.17.2e-1770113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T eE+ +l+ a++ +G++ W++I+r ++ gRt++ +k++w+ 
      Oeu045994.1  70 RRPFTDEEEVRLLAAHRVHGNK-WALISRLFP-GRTDNAVKNHWHV 113
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MMDETSGCNS DDPRTCPRGH WRPSEDEKLQ QLVEQYGPQN WNSIAEKLRG RSGKSCRLRW  60
FNQLDPRINR RPFTDEEEVR LLAAHRVHGN KWALISRLFP GRTDNAVKNH WHVIMARKQR  120
EQSKLSGKRS RQEISHNSKS LSYVFRRENS RSHDEYMPKI SNGNSGILEF QTQNKDQVFS  180
MASSFDSHAL WSFLIPRSSR ESNSSSAADS FIKKGSDKYN SSSNGLHLNS SVSRAFGDSV  240
VAFGTQNYKR VVPYPFGDGS RKHGRMNRDN SMSINVDSVH PFANARTSIE QKQEDQSIHK  300
KDIPFIDFLG VGISS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.11e-65MYB family protein