PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045488.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 1382aa MW: 154886 Da PI: 9.3254

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045488.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	1348	1374	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H Oeu045488.1 1348 YVCTeaGCGQTFRFVSDFSRHKRKtgH 1374 99********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1382 aa Download sequence
MAGLEASGGN IKVFPWLKSL PVAPEYHPTL AEFQDPIAYI FKIEKEASKY GICKIVPPVL 60 APSKKTVIAN LNRSLLALSN DLNPAPTFTT RQQQIGFCPR KHRPVQKPVW QSGENYTVLE 120 FEAMAKNFEK SYLKKYGKKG LNALEVETLY WKATVDKPFS VEYANDMPGS AFVVKKVGGK 180 GIEDPLTVGE TEWNMRGVSR SKSSLLRFMK EEIPGVTSPM VYIAMMFSWF AWHVEDHDLH 240 SLNYMHIGAG KTWYGVPREV AVAFEEVIRV QGYGGEINPL VTFATLAEKN TVMSPEVLVN 300 AGVPCCRLVQ NAGEFVVTFP RAYHSGFSHG FNCGEAANIA TPEWLRIAND AAVRRASINC 360 SPMVSHFQLL YDLALSLCSS LSKSICVEPR SSRLKDKKKS EGEILIKELF SQDVMLNNNT 420 LHILGKGSAV VVLPQNSLSS SNLQRGTLSA TRSRLFSRFC SPDLEFKVTK SIVCEDVTLD 480 RNQEVGEVRG YPVKGKVYSL CNGSEFPSLA PQTGNADSDV KRASQFDRLS DKGLFSCITC 540 GILCFACFAI VQPTEAAASY LMSADCSIFN DWEAAGNGYN LCTGDVMNPH SGSVLKRTPR 600 GLFDVPVGSA AQIGMVNDDR AMVVSNSKTQ KDTSALGLLA LMYDDSSDFE EEEVELHIPV 660 KDPETKGSDC TEGVHYSKKL GYTQIDGGNE VPIKISNSFA KHGPVREENK DIVYQSLDYS 720 NEIEIDKCKL VDSNSLTHSF RNLTKLQNST SNCNPVAGKE EETISTALVP LEKTTTSFAS 780 RSDKESSRMH VFCLQHAVQV EQRLNSFGGA RIFLVSHPDY PKLESQAKKV AEELKIDHLW 840 NDTPFREATE EDKEMIRLAL DSEDAIHGNG DWAVKLGINL CYSANLSRSP LYSKQMPYNA 900 VVYNAFGCRS PADTRENDGN GSGKQKRFAV AGKWCGKVWM SSQVHPLLTK KDFNEQDPTW 960 VEPDVKVRRP LDATRTAEAA STSCRTSRKR KRRPGNRSAM KAKSPKAESS EESSEDSLIW 1020 NSLKQVRSML GNKRMKKETH EPQNKGERSK RSFEALTEDE VEESPIRNSI RHQVKSKLRN 1080 KRTEKENPEP QNKQERSKKH FDTLTEAEVE EPVGNSHKQL KSKLGSKRVK KDNSMPQNTR 1140 ERTKKHIDLL NEDEVEESPI RNSRKQVKSK LENKKTKKAT PEPQNTRENN KKQSNSFIES 1200 ELEGWPGTRL RRRTSIPCKD SGLKSAKARP IPKMLHKNMI MKKSQAMKVP SSSNNAKIRD 1260 EEMEYPCNMD GCIMSFGSKQ ELMLHKRNIC PVKGCGKKLF SHKYLVQHQR VHTDDRPLKC 1320 PWKGCKMTFK WAWARTEHIR VHTGVRPYVC TEAGCGQTFR FVSDFSRHKR KTGHSSKKSK 1380 G*

Sequence ? help Back to Top

Protein Sequence Length: 1382 aa Download sequence

MAGLEASGGN IKVFPWLKSL PVAPEYHPTL AEFQDPIAYI FKIEKEASKY GICKIVPPVL  60
APSKKTVIAN LNRSLLALSN DLNPAPTFTT RQQQIGFCPR KHRPVQKPVW QSGENYTVLE  120
FEAMAKNFEK SYLKKYGKKG LNALEVETLY WKATVDKPFS VEYANDMPGS AFVVKKVGGK  180
GIEDPLTVGE TEWNMRGVSR SKSSLLRFMK EEIPGVTSPM VYIAMMFSWF AWHVEDHDLH  240
SLNYMHIGAG KTWYGVPREV AVAFEEVIRV QGYGGEINPL VTFATLAEKN TVMSPEVLVN  300
AGVPCCRLVQ NAGEFVVTFP RAYHSGFSHG FNCGEAANIA TPEWLRIAND AAVRRASINC  360
SPMVSHFQLL YDLALSLCSS LSKSICVEPR SSRLKDKKKS EGEILIKELF SQDVMLNNNT  420
LHILGKGSAV VVLPQNSLSS SNLQRGTLSA TRSRLFSRFC SPDLEFKVTK SIVCEDVTLD  480
RNQEVGEVRG YPVKGKVYSL CNGSEFPSLA PQTGNADSDV KRASQFDRLS DKGLFSCITC  540
GILCFACFAI VQPTEAAASY LMSADCSIFN DWEAAGNGYN LCTGDVMNPH SGSVLKRTPR  600
GLFDVPVGSA AQIGMVNDDR AMVVSNSKTQ KDTSALGLLA LMYDDSSDFE EEEVELHIPV  660
KDPETKGSDC TEGVHYSKKL GYTQIDGGNE VPIKISNSFA KHGPVREENK DIVYQSLDYS  720
NEIEIDKCKL VDSNSLTHSF RNLTKLQNST SNCNPVAGKE EETISTALVP LEKTTTSFAS  780
RSDKESSRMH VFCLQHAVQV EQRLNSFGGA RIFLVSHPDY PKLESQAKKV AEELKIDHLW  840
NDTPFREATE EDKEMIRLAL DSEDAIHGNG DWAVKLGINL CYSANLSRSP LYSKQMPYNA  900
VVYNAFGCRS PADTRENDGN GSGKQKRFAV AGKWCGKVWM SSQVHPLLTK KDFNEQDPTW  960
VEPDVKVRRP LDATRTAEAA STSCRTSRKR KRRPGNRSAM KAKSPKAESS EESSEDSLIW  1020
NSLKQVRSML GNKRMKKETH EPQNKGERSK RSFEALTEDE VEESPIRNSI RHQVKSKLRN  1080
KRTEKENPEP QNKQERSKKH FDTLTEAEVE EPVGNSHKQL KSKLGSKRVK KDNSMPQNTR  1140
ERTKKHIDLL NEDEVEESPI RNSRKQVKSK LENKKTKKAT PEPQNTRENN KKQSNSFIES  1200
ELEGWPGTRL RRRTSIPCKD SGLKSAKARP IPKMLHKNMI MKKSQAMKVP SSSNNAKIRD  1260
EEMEYPCNMD GCIMSFGSKQ ELMLHKRNIC PVKGCGKKLF SHKYLVQHQR VHTDDRPLKC  1320
PWKGCKMTFK WAWARTEHIR VHTGVRPYVC TEAGCGQTFR FVSDFSRHKR KTGHSSKKSK  1380
G*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	988	993	RKRKRR
2	989	994	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein