PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044390.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 338aa    MW: 37891.9 Da    PI: 7.7168
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044390.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP137.61.1e-42481992129
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssa......seceaesssss 81 
                  +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LG+dk+s+ti+WL++++k+aikelt++            +          sece +s +++
  Oeu044390.1  48 TGKKDRHSKICTAQGIRDRRMRLSVQVARKFFDLQDMLGYDKASNTIDWLFTNSKKAIKELTKNrpdqakisssidN---VksesfvSECEVASGVVE 142
                  79**************************************************************8887766655442...043445566655555555 PP

          TCP  82 asnsssg.......kaaksaa.kskksqksaasalnlak.esrakarararertrek 129
                  +sn++ +       +  +s++   ++ +++  ++ +++  esr kararare+t  k
  Oeu044390.1 143 NSNNEFKgvsaksaSPGNSHEkDDRNYTQKVVCKPKPNTrESRDKARARAREKTMIK 199
                  5544444777765533333331222333334444444447999********988755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGGTNTTNYK EGNSEPCKLN ENSADQVHRE AITPMRKRNP GPTARKRTGK KDRHSKICTA  60
QGIRDRRMRL SVQVARKFFD LQDMLGYDKA SNTIDWLFTN SKKAIKELTK NRPDQAKISS  120
SIDNVKSESF VSECEVASGV VENSNNEFKG VSAKSASPGN SHEKDDRNYT QKVVCKPKPN  180
TRESRDKARA RAREKTMIKR LENLSQWQKS ISNEFQELGF STSPFDAVEE SSSGDRKRDS  240
PHDVDWHLFG NQFADEDTIE KFLGGTTSSK CCPISDYQCY DAAVSGSTDS NNNFMGFLGD  300
CEMNNDMFNS NNSEMENMVS FSGNPTSYVT SDFLFLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-28TCP family protein