PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu044211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WOX | ||||||||
Protein Properties | Length: 244aa MW: 27145.1 Da PI: 5.3459 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48 | 2.2e-15 | 25 | 85 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ Oeu044211.1 25 RSRWTPKPEQILILESIFNSgMVNPPKNETVRIRKLLekygTVGDANVFYWFQNRRSRSRR 85 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 107.6 | 7.7e-35 | 24 | 87 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le+yG ++d+NVfyWFQNr++R+r++q Oeu044211.1 24 VRSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLLEKYGTVGDANVFYWFQNRRSRSRRRQ 87 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEDRVQDTNR QPNHGSETER NEPVRSRWTP KPEQILILES IFNSGMVNPP KNETVRIRKL 60 LEKYGTVGDA NVFYWFQNRR SRSRRRQRQI QASLTGEQQQ TQTSSAGGAI QYENTGSSSA 120 GFPPNSLCFP IYSASCSLVG NENSEDLFSF SGGHPGIPEI EQNPSIFCPA ETSNLQYQSG 180 LITVFINGVP TEIPQGAVDM KSMFGEEFVL FHSSGVPVQV NEYGFLVQSL QHGESYFLVP 240 RNS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 1e-70 | WOX family protein |