PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043966.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family BBR-BPC
Protein Properties Length: 285aa    MW: 31533.1 Da    PI: 9.5241
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043966.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind323.56.2e-9912841301
    GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllall 85 
                  mddd+   rn+gyyep   l+ +lglqlm s++erd+k      +n  + + ++a+ +rd          m++  rd+++++        ++k+l++ 
  Oeu043966.1   1 MDDDALSMRNWGYYEPP-PLRGHLGLQLMPSVTERDTKSflsGCSNPVMVAANGAFRPRDcvvteppvtqMDY-VRDSWINH--------RDKFLHMF 88 
                  9***9999*******99.9*******************99986677779************************.9******9........78999999 PP

    GAGA_bind  86 lvenslasalpvgvqvlsgtks.idslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkes 182
                  + +      +p    vl + +    s+q l++p+++d++             ++e+++ ++e+   kkr+ a++ k +k+kk +k  +++k++ +++ 
  Oeu043966.1  89 PGNP----YNP----VLAEPSGsHSSMQILNQPDTTDDTKV-----------TVEEPSIETEVVPAKKRSAAAVLKPSKSKKSRKVVSVPKENGNSSV 167
                  9333....233....33333330334455555555554433...........2233444445556666777788888888899998889988888888 PP

    GAGA_bind 183 aderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydls 280
                    +r+k+ kk+id+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtttiS+yPLP+s krrgaRiagrKmSqgafkk+LekLa+e y++ 
  Oeu043966.1 168 --NRAKTIKKNIDFVINGIDMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTTISMYPLPMSNKRRGARIAGRKMSQGAFKKVLEKLASEDYNFT 263
                  ..79********************************************************************************************** PP

    GAGA_bind 281 npvDLkdhWAkHGtnkfvtir 301
                  np+DLk++WAkHGtnkfvtir
  Oeu043966.1 264 NPIDLKTYWAKHGTNKFVTIR 284
                  ********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDDDALSMRN WGYYEPPPLR GHLGLQLMPS VTERDTKSFL SGCSNPVMVA ANGAFRPRDC  60
VVTEPPVTQM DYVRDSWINH RDKFLHMFPG NPYNPVLAEP SGSHSSMQIL NQPDTTDDTK  120
VTVEEPSIET EVVPAKKRSA AAVLKPSKSK KSRKVVSVPK ENGNSSVNRA KTIKKNIDFV  180
INGIDMDISG IPIPVCSCTG APQQCYRWGC GGWQSACCTT TISMYPLPMS NKRRGARIAG  240
RKMSQGAFKK VLEKLASEDY NFTNPIDLKT YWAKHGTNKF VTIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.18e-92BBR-BPC family protein