PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043499.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 426aa MW: 44885.7 Da PI: 6.5117

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043499.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.8e-12	231	276	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq Oeu043499.1 231 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 276 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MNINSLLNQE QSLQEMNNHQ NGQPQMSSHF DPTSSHDDFL DQMMSSIPSS NSSFNWDVSS 60 DAARADHALP STLLSQFDDQ SAQLISKLRQ HQISSGAAKA LMLQQQLLLS RGLTGNGLRT 120 PSGASGGESG LLQIPLNLTN GDHADVVDGS FQSTNPADDA SVQGLFNGFT GTLGQTANQS 180 QHFHHPQAQN FGASAVPGMN QPAASGSTGG GTPAQARQRV RARRGQATDP HSIAERLRRE 240 RIAERMKALQ ELVPNANKTD KASMLDEIID YVKFLQLQVK VLSMSRLGGA TAVAPFVADM 300 SSERRSSNGT QTASSSNNNE TVTVTENQVA KLMEEDMGTA MQYLQGKGLC LMPISLATAI 360 SAATCHSRNP LAATNNLNTS KNPLLSGEHG GPTSPSMSVL TVQSAAIGGN GAGEASVKDA 420 TSFSK*

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MNINSLLNQE QSLQEMNNHQ NGQPQMSSHF DPTSSHDDFL DQMMSSIPSS NSSFNWDVSS  60
DAARADHALP STLLSQFDDQ SAQLISKLRQ HQISSGAAKA LMLQQQLLLS RGLTGNGLRT  120
PSGASGGESG LLQIPLNLTN GDHADVVDGS FQSTNPADDA SVQGLFNGFT GTLGQTANQS  180
QHFHHPQAQN FGASAVPGMN QPAASGSTGG GTPAQARQRV RARRGQATDP HSIAERLRRE  240
RIAERMKALQ ELVPNANKTD KASMLDEIID YVKFLQLQVK VLSMSRLGGA TAVAPFVADM  300
SSERRSSNGT QTASSSNNNE TVTVTENQVA KLMEEDMGTA MQYLQGKGLC LMPISLATAI  360
SAATCHSRNP LAATNNLNTS KNPLLSGEHG GPTSPSMSVL TVQSAAIGGN GAGEASVKDA  420
TSFSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	241	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	6e-60	bHLH family protein