PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042841.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 448aa MW: 48822.2 Da PI: 8.4769

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042841.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.3	6.5e-24	150	194	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h+++ rsrk++e+ Oeu042841.1 150 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKSKARSRKPVET 194 79****************************************997 PP
2	QLQ	50.6	5.8e-18	94	129	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Q+q+L++Q ++yKy++a+ PvPp+Ll+++++ Oeu042841.1 94 LFTDKQWQELERQNMIYKYIMASIPVPPQLLLQLSN 129 6*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MGDGNKIGID SSLECDFGLG LKMQVQPTES SICKRAMVFP HYYQLSSSQN NSFSGVGSGG 60 GVSNIYDSLG GAVFSRSSHY NAPKGGVLIS GKALFTDKQW QELERQNMIY KYIMASIPVP 120 PQLLLQLSNA PDSFQSKTSG LDLRFSRGSD PEPWRCRRTD GKKWRCSRDV APDQKYCERH 180 AHKSKARSRK PVETQSHNST TTTNNSQQSL LLPPNTPTNQ KQMDFTAPYD QTRCTEWLMG 240 GGSSSGTITL PVSTCNRQWH QRMQSSSKLG HFHRDNKNNL SVFQQDFMNS FLDHPKLAYL 300 QGNPDLNTEK TQTTRHFIDE WSTGEKEGNE GSAASLNKKR FSPSSLSLSM SRGIGIGEDN 360 DRNAAMGIGT MNTVKENDGF LNTVSWLSSP PGGPLGEVLG LGNGAGGKGC LDLTSPHGYS 420 NSTTNSSCCS KSSCEDGIGT HSHNFIG*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MGDGNKIGID SSLECDFGLG LKMQVQPTES SICKRAMVFP HYYQLSSSQN NSFSGVGSGG  60
GVSNIYDSLG GAVFSRSSHY NAPKGGVLIS GKALFTDKQW QELERQNMIY KYIMASIPVP  120
PQLLLQLSNA PDSFQSKTSG LDLRFSRGSD PEPWRCRRTD GKKWRCSRDV APDQKYCERH  180
AHKSKARSRK PVETQSHNST TTTNNSQQSL LLPPNTPTNQ KQMDFTAPYD QTRCTEWLMG  240
GGSSSGTITL PVSTCNRQWH QRMQSSSKLG HFHRDNKNNL SVFQQDFMNS FLDHPKLAYL  300
QGNPDLNTEK TQTTRHFIDE WSTGEKEGNE GSAASLNKKR FSPSSLSLSM SRGIGIGEDN  360
DRNAAMGIGT MNTVKENDGF LNTVSWLSSP PGGPLGEVLG LGNGAGGKGC LDLTSPHGYS  420
NSTTNSSCCS KSSCEDGIGT HSHNFIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-31	GRF family protein