PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042728.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 604aa MW: 69428.6 Da PI: 4.9759

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042728.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.5e-05	574	592	2	20
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 +C++Cgk F ++ L++H+ Oeu042728.1 574 VCEKCGKEFESRNKLHKHL 592 6*****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MASSEKRCLY EVLGLNRDCT PDEIRSAYKK MALQRHPDKL VQSGVPEAEA EATAAFQELV 60 NAYEVLSDSK ERAWYDSHRS QILFSSNNSS KSSGPVPDLF SFFSKSVYSG YSDSGRGFYK 120 VYGEIFEKIY ATEFNFAKRL GFPLPKEAPV MGNLESPYAQ VTAFYNYWLG FVTSMDFCWV 180 DQYDVMTGPN RKSRRVMEDE NMKLRKKAKR EYNDTVRGLA EFVKKRDRRV IDMQAKRNEE 240 MEKKREQERQ RKKELEKQKA EKARNYEEPE WTMVEEVESE ESEDAVEEDA KRKELYCVAC 300 GKKFKSDKQW KNHEQSKKHK EKVAELREEF DEEDREFEET EGNERKDEEE EEGYFSADDE 360 VNDLRNQFED SIGIQGQESD EENAESSEDD GIVDIDNGRR SRRVSAEMES DDDEASLLEA 420 MVSGHKTRKK LDARHQTKVP EKKIQMEVDV DEMDFMECNN TKGSRSNMGG RRQRGRTQEE 480 ETIRADVIQA NEDNGELEEQ NGQDDDSHVE VSTSHPLQES ATEGKGDDAS ISGHKLPKQA 540 VNNKNTTKKS NASKLKVAPK GRKQKVAAKT FGNVCEKCGK EFESRNKLHK HLGETGHASL 600 KFE*

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MASSEKRCLY EVLGLNRDCT PDEIRSAYKK MALQRHPDKL VQSGVPEAEA EATAAFQELV  60
NAYEVLSDSK ERAWYDSHRS QILFSSNNSS KSSGPVPDLF SFFSKSVYSG YSDSGRGFYK  120
VYGEIFEKIY ATEFNFAKRL GFPLPKEAPV MGNLESPYAQ VTAFYNYWLG FVTSMDFCWV  180
DQYDVMTGPN RKSRRVMEDE NMKLRKKAKR EYNDTVRGLA EFVKKRDRRV IDMQAKRNEE  240
MEKKREQERQ RKKELEKQKA EKARNYEEPE WTMVEEVESE ESEDAVEEDA KRKELYCVAC  300
GKKFKSDKQW KNHEQSKKHK EKVAELREEF DEEDREFEET EGNERKDEEE EEGYFSADDE  360
VNDLRNQFED SIGIQGQESD EENAESSEDD GIVDIDNGRR SRRVSAEMES DDDEASLLEA  420
MVSGHKTRKK LDARHQTKVP EKKIQMEVDV DEMDFMECNN TKGSRSNMGG RRQRGRTQEE  480
ETIRADVIQA NEDNGELEEQ NGQDDDSHVE VSTSHPLQES ATEGKGDDAS ISGHKLPKQA  540
VNNKNTTKKS NASKLKVAPK GRKQKVAAKT FGNVCEKCGK EFESRNKLHK HLGETGHASL  600
KFE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-130	C2H2 family protein