PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042662.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 523aa    MW: 59854.6 Da    PI: 4.544
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042662.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS153.22.3e-471585222374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  ++l+ +  ea +++++ela+ +++ ++e + p g++m+R+ +y+ + L++   +           +++   +  +  aa+k+f++  P+ +++h++aN
  Oeu042662.1 158 RHLIKAYGEATENKQQELARVIVNSIEEKSDPLGKTMERVSFYLFQ-LKQNQGE---------YLRQE---SLRNYRAAFKAFYQGLPYGRLAHFIAN 242
                  677777889999999****************************986.3322222.........12333...366778899****************** PP

         GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  +aIlea+  + e++Hi+Dfdi++G+QWp+ ++a++        l+ T ++s ++       +eet++rL++ A+elg++++++    k+++dl  e  
  Oeu042662.1 243 SAILEALPDDaETIHIVDFDIEEGIQWPPVIEAISRM---HKALKFTMIKSDDECssLCWDIEETKQRLQDHATELGLNLQIDQ---KSVSDLASEIT 334
                  *******88879**********************975...457********77775445689*********************8...78888877777 PP

         GRAS 195 rvkp....gEalaVnlvlqlhrlldesvsleserdevLklvksl......sPkvvvvveqe...adhnsesFlerflealeyysalfdsleaklpres 279
                  r+k+    +E l+ n++++l ++   ++ ++s+  ++L++ k++      s+ +v++   e   ++  s+sF   + + l++y alf+sle+++p++ 
  Oeu042662.1 335 RTKKrgrgREWLVFNCMFRLPHMA--RMRQRSHAARFLQVAKEIltnyraSAGMVTLGYGEtefCSQASSSFSSFLDKLLKHYQALFESLEQSFPAHL 430
                  77777888***************9..6666666799**99998855444467789987555336666899************************9987 PP

         GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                   ++r+ +E  +l++  +++     +e      +l++ ++  +e G++  +lse+   +ak ++++++ + y+v+   ++++++vl Wk+ pLv vS W
  Oeu042662.1 431 aDARTAMESLFLAPYMSSLHWFLDSE------KLMENSDLQSETGLEGQKLSEESIIEAKQIVNEIE-NAYKVKiegHRKHEMVLEWKGTPLVRVSTW 521
                  799**********9999887666665......7777788899*************************.55999976777******************* PP

         GRAS 374 r 374
                  +
  Oeu042662.1 522 T 522
                  5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    
MQSEKILPFW ETFDIPCSNL DQSRLHDPQM DFLMWDNLDF SFSLTSPEES SIISTNSNVS  60
TMFSDELFDL PNLSDDIFIP SPMEGLATIS REQITDICGW INESDYKGNY STLVPMYGEE  120
YSPCFSLESS EDPVVFPMMN GSNTLPGDME MDNETSLRHL IKAYGEATEN KQQELARVIV  180
NSIEEKSDPL GKTMERVSFY LFQLKQNQGE YLRQESLRNY RAAFKAFYQG LPYGRLAHFI  240
ANSAILEALP DDAETIHIVD FDIEEGIQWP PVIEAISRMH KALKFTMIKS DDECSSLCWD  300
IEETKQRLQD HATELGLNLQ IDQKSVSDLA SEITRTKKRG RGREWLVFNC MFRLPHMARM  360
RQRSHAARFL QVAKEILTNY RASAGMVTLG YGETEFCSQA SSSFSSFLDK LLKHYQALFE  420
SLEQSFPAHL ADARTAMESL FLAPYMSSLH WFLDSEKLME NSDLQSETGL EGQKLSEESI  480
IEAKQIVNEI ENAYKVKIEG HRKHEMVLEW KGTPLVRVST WT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-20GRAS family protein