PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042649.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 304aa    MW: 33589.8 Da    PI: 9.4294
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042649.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19171205135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C+ C+ttkTplWR+gp g+k+LCnaCG+++rk ++
  Oeu042649.1 171 CTDCNTTKTPLWRSGPKGPKSLCNACGIRQRKARQ 205
                  ********************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MNPINLNSSP FVLEPNEELD DQNPPQFGVN HHIASSSSHS CHYFFNSTQD YAKYYRHELY  60
QPQQHQEDFS YAYGGGSYDV ENKVDSGLKL TLWKKLDPSE SVLENNNNPV KWMSSKMRLM  120
HKMKNSDHAG LKITSGGTEK YENHQKQPSS SLETDLSSNS ISNNNSPIRV CTDCNTTKTP  180
LWRSGPKGPK SLCNACGIRQ RKARQAMAAA AAADANGTAI TTKLSPMKIK VHHKDKTSKS  240
GHATQLKKRC KITSGPSNDT KKLGLEDFLI NLSKNLALNR VFPQDEKDAA ILLMALSSGL  300
VHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-33GATA family protein