PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu042528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 27179.9 Da PI: 8.0464 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1e-18 | 114 | 164 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ taeeA a+++a+ +++g Oeu042528.1 114 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAGLAYDRAAYRMRG 164 7********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MHQPIFSELT PVNFSVESSP VYSRSSSFSS LMPCLTETWG DLPLKVDDSE DMVIYGLLRD 60 AVTVGWTPFN DVKVETRIEV EPEMSIAAVK TEYVDPPPMT AKPAVAKLKG RPRHYRGVRQ 120 RPWGKFAAEI RDPAKNGARV WLGTYETAEE AGLAYDRAAY RMRGSKALLN FPHKVGSNEP 180 DPVRVTAKRR SPEPAASSAS ESCSPKRIKK EAVAEQAELE VESRSSGCQV GWQMTQLPLG 240 GQLLVT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-62 | ERF family protein |