PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu042019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 179aa MW: 20694.4 Da PI: 9.9483 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.6 | 3.8e-20 | 40 | 84 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grW + Ede+l ++v+q+G+ +W++Ia+++g gRt+k+c++rw++ Oeu042019.1 40 GRWRPSEDEKLEQLVAQYGPQNWNAIAEKLG-GRTGKSCRLRWHNQ 84 9******************************.************96 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.8e-15 | 92 | 135 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eE+e+l+ +++ G++ W++Ia++++ gRt++ k++w+ + Oeu042019.1 92 RAFSKEEEERLLAVHRVIGNK-WALIAKYFP-GRTDNAMKNHWHVL 135 689******************.*********.***********987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence |
MQPQEDSISM ESLAIENSNE KSDIQENENV RRQSKVCLTG RWRPSEDEKL EQLVAQYGPQ 60 NWNAIAEKLG GRTGKSCRLR WHNQLDPMIN KRAFSKEEEE RLLAVHRVIG NKWALIAKYF 120 PGRTDNAMKN HWHVLMARKH RVRELSTSYR KISNRYTNSF LPCSGRVSNP TPPDSCWG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G29020.1 | 2e-58 | MYB family protein |