PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu040704.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 339aa    MW: 36342.3 Da    PI: 6.844
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu040704.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding409.2e-13104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar    +Rt+ q+ s+ qky
      Oeu040704.1 104 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKY 148
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYMGG GGSGSGTPLN  60
GVAHDSPADT PDHPSSGSGA ADGYASEDFV AGSSSSRERK KGVPWTEEEH RMFLLGLQKL  120
GKGDWRGIAR NYVITRTPTQ VASHAQKYFI RQSNISRRRR RSSLFDIVAD EAADDPVVAR  180
DFFTVDHPQA ETQSSTAFPP LPVDEECESM ESANSNEGET MLPKPEGAQY PFPAVYPTYV  240
APFFPFSIPF WPGYNPEPVK EETHEVLKPT AVHSKDPINV DELVGMSKLS LGESIGDSGP  300
SSLSLKLVEG SSRPSAFHAN PGSGGSGISS SHSPIRAV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-115MYB_related family protein