PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu040292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 226aa MW: 26416.7 Da PI: 8.3185 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.3e-17 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv +v+++G ++W+ Ia+ g++Rt+k+c++rw +yl Oeu040292.1 8 KGPWTEQEDAQLVLYVNLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 55 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.8 | 4.6e-17 | 61 | 106 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ Oeu040292.1 61 RGKMTPHEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MVQEETRKGP WTEQEDAQLV LYVNLFGDRR WDFIAKVSGL KRTGKSCRLR WVNYLHPDLK 60 RGKMTPHEER LVLELHSKWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QEKKKALSPS 120 SSSSSFSSNS PTIEFTSVTK NNECSFYDTG GRKNDFEVDM DEIWKDIEVS EGNCNILCQT 180 IVSPTWDFFQ DSSLWPIDKE EQSKMVLPVS DHFNSFTFYN QEMTG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 6e-77 | MYB family protein |