PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039588.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 531aa    MW: 58563.2 Da    PI: 6.1586
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039588.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.81.2e-24101203199
                  EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                  f k+ltpsd+++ g +++p+ +a+ +         ++ +  tl+++d++++ We+++iyr++++r++lt+GW++Fv++++L +gD+vvF++++ s++e
  Oeu039588.1 101 FAKILTPSDANNGGGFSVPRFCADLIfprldfsADPPVQ--TLIINDSQNNAWEFRHIYRGTPRRHLLTTGWSRFVNSKRLVSGDSVVFMRKK-STGE 195
                  89*****************9888766*****96555545..8************************************************655.9999 PP

                  .EEEEE-S CS
           B3  92 lvvkvfrk 99 
                  l+v+++r+
  Oeu039588.1 196 LFVGIRRA 203
                  ******96 PP
2Auxin_resp83.64.4e-28228311183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                  a++ a+++ +Fev+Y+Pr++ ++Fvv++ekve++l+  +s+GmR+kma+etedss++++ +Gtv++++ +  v    S+Wr+L+
  Oeu039588.1 228 AIETAEKGRAFEVLYYPRTGVPDFVVSAEKVEDSLRFCWSAGMRVKMAVETEDSSRTSWfQGTVSSTTSSIGVPSAASPWRMLE 311
                  5678999***************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    
MDPAIWRATA GAAVHIPAVN SRVYYFPQGH LEHFSSIKNY NILLKTPLVS CQVLDVSFLS  60
DPSSDQPFAK IRLLPLQSRE LHIITENAEK RDMDESDVVS FAKILTPSDA NNGGGFSVPR  120
FCADLIFPRL DFSADPPVQT LIINDSQNNA WEFRHIYRGT PRRHLLTTGW SRFVNSKRLV  180
SGDSVVFMRK KSTGELFVGI RRAVRGIAST WNCPVAVENS TVKKVIEAIE TAEKGRAFEV  240
LYYPRTGVPD FVVSAEKVED SLRFCWSAGM RVKMAVETED SSRTSWFQGT VSSTTSSIGV  300
PSAASPWRML EVMWDEHEVL QNAKTVSPWQ VEYVLPAPQI HSALPPLKKF KVGQSPGKLP  360
DGEGELFIPT TESTDLMIGH LNSSMFNYNS FPAGMQGARL DQFCVSTPSN SHSDYSHPII  420
SNFMKNGTQP ELKISTELNI GSSRVDNLSP DSQSSVHFSC TELVGKRGSV SSIQLFGKII  480
CIAEPIEACS DNNVSLAEGE RNAVYSESDA VIDMQDPSST HTCAELFLHS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-142ARF family protein