PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038054.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 498aa MW: 57694.5 Da PI: 4.8936

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038054.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ +Ed +l+++++ +G g W++ + g++Rt+k+c++rw++yl Oeu038054.1 22 KGPWSSDEDSKLINYIAIHGEGGWEALSCNAGLRRTGKSCRLRWLNYL 69 79********************************************97 PP
2	Myb_DNA-binding	43.2	9.1e-14	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++ ++++ ++G++ W+ Ia++++ gRt++++k++w++ Oeu038054.1 75 RGNITPQEQLFIIELRLRYGNR-WTQIAKRLP-GRTDNEIKNHWRT 118 7999****************.*****.*********97 PP
3	Myb_DNA-binding	43.2	9.1e-14	295	338	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++ ++++ ++G++ W+ Ia++++ gRt++++k++w++ Oeu038054.1 295 RGNITPQEQLFIIELRLRYGNR-WTQIAKRLP-GRTDNEIKNHWRT 338 7999****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MYAKEIYGSS IPQKEEERSI RKGPWSSDED SKLINYIAIH GEGGWEALSC NAGLRRTGKS 60 CRLRWLNYLN PNVRRGNITP QEQLFIIELR LRYGNRWTQI AKRLPGRTDN EIKNHWRTII 120 KKQAKQLKCD VNSIQFLDIM RSMWLPRIME EQMHPITEVN SESQSQSSST DFDRTNCQRQ 180 KLMTDSEILQ TGAMAVEMNC EANMSDVSVL DNVEDVNWNG DPLSVQSFGP ELGYYPFYYG 240 FDGNENRDDW LSSEDSFTMS LNDEGFWVST STGLRRTGKS CRLRWLNYLN PNVRRGNITP 300 QEQLFIIELR LRYGNRWTQI AKRLPGRTDN EIKNHWRTII KKQAKQLKCD VNSIQFLDIM 360 RSMWLPRIME EQMHPISEVN SESQSQSSSA DFDRTNCQRQ KLMTDSEILQ TGAMAVEMNC 420 EANMSDVSVL DNVEDVNWNG DPLSVQSFGP ELGYYPFYYG FDGNENRDDW LSSEDSFTMS 480 LNDEGFWVST STGFNQF*

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MYAKEIYGSS IPQKEEERSI RKGPWSSDED SKLINYIAIH GEGGWEALSC NAGLRRTGKS  60
CRLRWLNYLN PNVRRGNITP QEQLFIIELR LRYGNRWTQI AKRLPGRTDN EIKNHWRTII  120
KKQAKQLKCD VNSIQFLDIM RSMWLPRIME EQMHPITEVN SESQSQSSST DFDRTNCQRQ  180
KLMTDSEILQ TGAMAVEMNC EANMSDVSVL DNVEDVNWNG DPLSVQSFGP ELGYYPFYYG  240
FDGNENRDDW LSSEDSFTMS LNDEGFWVST STGLRRTGKS CRLRWLNYLN PNVRRGNITP  300
QEQLFIIELR LRYGNRWTQI AKRLPGRTDN EIKNHWRTII KKQAKQLKCD VNSIQFLDIM  360
RSMWLPRIME EQMHPISEVN SESQSQSSSA DFDRTNCQRQ KLMTDSEILQ TGAMAVEMNC  420
EANMSDVSVL DNVEDVNWNG DPLSVQSFGP ELGYYPFYYG FDGNENRDDW LSSEDSFTMS  480
LNDEGFWVST STGFNQF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	3e-59	MYB family protein