PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu037912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 145aa MW: 15991.3 Da PI: 5.5204 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 55.2 | 2.1e-17 | 1 | 56 | 45 | 100 |
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +l ++p+++r da+++l+yeA +r++dPvyG+vg+i++lqqq+ +l+aela+++++ Oeu037912.1 1 MLLRIPPHKRFDAVATLCYEALVRVKDPVYGCVGHIFTLQQQVVNLQAELAYVQAR 56 567899**********************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MLLRIPPHKR FDAVATLCYE ALVRVKDPVY GCVGHIFTLQ QQVVNLQAEL AYVQARISTL 60 HRIPPPPPPP PPQPPSLSCS NVQSALGFIS NIMTHFETSQ CEETSTEVAS FCNAVDEELE 120 DGDLQSLYIS RCLDVVKFRP STSH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45410.1 | 3e-30 | LBD family protein |