PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu037892.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 506aa MW: 53603.6 Da PI: 9.0531

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu037892.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu037892.1 53 FVCEICNKGFQRDQNLQLHRRGH 75 89*******************88 PP
2	zf-C2H2	12	0.00064	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + Oeu037892.1 129 WKCEKCSKNYAVQSDWKAHSKIC 151 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MNNSTASVDS FSGNQTAPPK LTAKKKRNLP GMPDPDAEVI ALSPRTLLAT NRFVCEICNK 60 GFQRDQNLQL HRRGHNLPWK LRQRSSKEVK KRVYVCPEPG CIHHSPSRAL GDLTGIKKHF 120 CRKHGEKKWK CEKCSKNYAV QSDWKAHSKI CGSREYKCDC GTLFLRRDSF ITHVGFCDAL 180 GGKTAKKNTA LVPSSADEDP KIQTVMPSPP PQEVAAPSQP PVAPPPQASS PSATAVASSV 240 LPLQNLELPE SSSYNSTTTR IFEETPTVSD SAANYSSNSL SSSNGSTNSN VFSSLFASST 300 SSGSLQSKAT RFPGFFETMA RPKQTFDIAL CPSSEPISLC LMNQGSAILK TAEQDGRQYA 360 RPLQPAMSAT ALLQKAAQVG VAASNVSVLR GLGLVSSLSP SSEPQRWHRQ EIESEGASLA 420 SDLGLGLGLA YDGGSALTEL MLGTPSVFGP KHATLDLLGL GMAARGGPTG GLSAIMKSIN 480 DGLDVAATAA AFGDGEFSGK DMGRS*

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MNNSTASVDS FSGNQTAPPK LTAKKKRNLP GMPDPDAEVI ALSPRTLLAT NRFVCEICNK  60
GFQRDQNLQL HRRGHNLPWK LRQRSSKEVK KRVYVCPEPG CIHHSPSRAL GDLTGIKKHF  120
CRKHGEKKWK CEKCSKNYAV QSDWKAHSKI CGSREYKCDC GTLFLRRDSF ITHVGFCDAL  180
GGKTAKKNTA LVPSSADEDP KIQTVMPSPP PQEVAAPSQP PVAPPPQASS PSATAVASSV  240
LPLQNLELPE SSSYNSTTTR IFEETPTVSD SAANYSSNSL SSSNGSTNSN VFSSLFASST  300
SSGSLQSKAT RFPGFFETMA RPKQTFDIAL CPSSEPISLC LMNQGSAILK TAEQDGRQYA  360
RPLQPAMSAT ALLQKAAQVG VAASNVSVLR GLGLVSSLSP SSEPQRWHRQ EIESEGASLA  420
SDLGLGLGLA YDGGSALTEL MLGTPSVFGP KHATLDLLGL GMAARGGPTG GLSAIMKSIN  480
DGLDVAATAA AFGDGEFSGK DMGRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-114	C2H2 family protein