PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu037652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 219aa MW: 23995.6 Da PI: 4.7325 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0013 | 185 | 201 | 1 | 17 |
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 ++Cp C k+Fsr n++ Oeu037652.1 185 FSCPLCFKTFSRYNNMQ 201 89*********988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MTDPYPNCFN GWFNLKPFSH FSSSTSTSTA AASTSTSTPE SLYTFSYIHS TSSSNNNSLY 60 YTQYESSPPS PPIREALPLL SLSPTRAVSQ HSSCTAMDLD NKKLDNENQG SVYPDDDETV 120 TLALNLRLPT PDADLISRFI SSTSAEANYS NEDVTVANGY STSPLNKGQY WIPTPAQILM 180 GPTQFSCPLC FKTFSRYNNM QVLKLMLVEN AGKLSSRE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51220.1 | 9e-25 | C2H2 family protein |