PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037501.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 248aa    MW: 26392.5 Da    PI: 8.6829
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037501.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.001697119123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ykC+ C+k F +   L  H  +H
  Oeu037501.1  97 YKCSVCNKAFGSYQALGGHKASH 119
                  9*********9999998888777 PP
2zf-C2H213.90.00016152174123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y+C++C+++F++   L  H r+H
  Oeu037501.1 152 YECTICHRCFPTGQALGGHKRRH 174
                  99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MALEALNSPT TRIPVFSLEN TSLGSVEPCI KGKRSKRQRS VDSHELSEEE YLALCLIMLA  60
RSGGSTVENQ QKRSQTPLPL PPAPPVMMTL DSSKVLYKCS VCNKAFGSYQ ALGGHKASHR  120
KSAGRSGGDD QSTNSTTLSA TTSGGSGSGR TYECTICHRC FPTGQALGGH KRRHYEGGAA  180
SNSGAFASSA VSSLEGIGST VSHRNFDLNL PASPEFWPGF SSGEDEVESP HPLKKSRHFL  240
QSKLEIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-49C2H2 family protein