PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu036660.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 390aa MW: 43859.9 Da PI: 7.5958

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu036660.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl Oeu036660.1 14 KGLWSPEEDEKLIHHITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44.4	3.8e-14	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ Oeu036660.1 67 RGTFSQEEQNLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 899*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLIHHIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEQNLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQKG 120 IDPNTHNPFS EVENYEEKPS ASSIKNNHQD QKTSDGSSEP IFVESKNCNN IGITATQNGN 180 LSSVGMDHDF FLNRFVANHE TSTTSCKNSD LSRLLSFQQL NCGPNTTNLY FTPNSTTSAM 240 ARNPLSPPRT NYEITPRPPS VLPSILAPLI CIKPNVNQPS DSSISPFGVN KFQNTDFFEN 300 NGFPWGKSEE LESHIHASEA EIPQDIKWNE HLQTPFLLNN SIQNQTHLAT EDSVSAANWH 360 SNQLQQPLQS AEVYSKHLQM LSASFGQFS*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLIHHIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEQNLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQKG  120
IDPNTHNPFS EVENYEEKPS ASSIKNNHQD QKTSDGSSEP IFVESKNCNN IGITATQNGN  180
LSSVGMDHDF FLNRFVANHE TSTTSCKNSD LSRLLSFQQL NCGPNTTNLY FTPNSTTSAM  240
ARNPLSPPRT NYEITPRPPS VLPSILAPLI CIKPNVNQPS DSSISPFGVN KFQNTDFFEN  300
NGFPWGKSEE LESHIHASEA EIPQDIKWNE HLQTPFLLNN SIQNQTHLAT EDSVSAANWH  360
SNQLQQPLQS AEVYSKHLQM LSASFGQFS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-107	MYB family protein