PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu033895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | GATA | ||||||||
Protein Properties | Length: 130aa MW: 14296.4 Da PI: 9.5604 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.6 | 9.7e-20 | 34 | 67 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C +tkTp+WR+gp g+ktLCnaCG++yr+ + Oeu033895.1 34 CTHCEVTKTPQWREGPTGPKTLCNACGVRYRSGR 67 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MDEGSQKAKA SPMVSDSVEL QSTSLQRVAA SKKCTHCEVT KTPQWREGPT GPKTLCNACG 60 VRYRSGRLYP EYRPAASPTF VPSLHSNSHK KVIEMRNKGK QHTAKVEEPL ISPHPGFVPM 120 GSYLFDFMC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 6e-41 | GATA family protein |