PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033861.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 333aa    MW: 35947.4 Da    PI: 6.9669
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033861.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.4e-17242275134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Oeu033861.1 242 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 275
                  99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGPNFMDEID CGNFFDQIDD LMEFPPENEC AGGGLVGNGD IKDFPSIWDD ALRDTDPLFC  60
GSTSNTASDL STELAVPYED IVQLEWLSTF VEDSFSGGGS TFGKENLCGN TEPSHNQFQS  120
SSPISVLESS SSSSSSCAGG KTMPLSPSHR GPQRARSKRP RPATFNPRPA IQLISPPFSS  180
IQAPQPFVTP GVSSEGENFA ESQPVKKIPK PVYGVEKKKK KIKLSIPPES NQNPSTQAVR  240
KCLHCEITKT PQWRAGPMGP KTLCNACGVR YKSGRLYPEY RPAASPTFSP TLHSNSHKKV  300
VEMRSKIGER SVANTPTAAK PEFTPEASPV CM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-39GATA family protein