PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033345.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 279aa MW: 31616 Da PI: 4.768

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033345.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	121.8	3.7e-38	10	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 aCaaCk++rrkC++dC+lapyfp++q+k f+nvh+lFG+sn++k+l +l++++ +edam+s++ye+++r r PvyG+ +i +l+ ql+++ +el ++ Oeu033345.1 10 ACAACKYQRRKCSSDCPLAPYFPSNQSKMFQNVHRLFGVSNITKILGNLETKDqKEDAMKSIIYESDMRERFPVYGCSTIICQLRLQLHHALEELRYV 107 7**********************************************666549************************************99988 PP DUF260 98 kee 100 ++ Oeu033345.1 108 YSQ 110 665 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MTVKGGTSPA CAACKYQRRK CSSDCPLAPY FPSNQSKMFQ NVHRLFGVSN ITKILGNLET 60 KDQKEDAMKS IIYESDMRER FPVYGCSTII CQLRLQLHHA LEELRYVYSQ LEIYKQQFNK 120 PSGSTSYYSS PTHLEFSMYS NTDVSQTFQP GNEMTNYAMN NQFFANENIG FYAESSNTMT 180 RPVLGYDPYC DMNCNQSITL QAQMDAYEIQ QEREISQDYE DTHFNTTADD RQSYIETKGI 240 CDSSSESSLK DATQSSSEQV SQSELRNAAA CFSLTTVN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	4e-45	LBD family protein