PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032369.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 301aa MW: 34100.7 Da PI: 4.5664

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032369.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.7	2e-18	55	108	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ +++ +LA++lgL+ rqV vWFqNrRa++k Oeu032369.1 55 KKRRLNVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWK 108 4568999**********************************************9 PP
2	HD-ZIP_I/II	124.2	5.9e-40	54	144	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kkrrl+ +qvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE dy Lk++ydalk + e+L+ ++e+L +e+ Oeu032369.1 54 QKKRRLNVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEIDYGLLKANYDALKLNYETLQCDNEALLREI 144 69***********************************************************************************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKRLGSSDSL GAIMSICPNT TDEHEQVNNH VYSREFQSMF EGLDEEGGVE ELGQKKRRLN 60 VDQVKALEKN FEVENKLEPD RKVKLAQELG LQPRQVAVWF QNRRARWKTK QLEIDYGLLK 120 ANYDALKLNY ETLQCDNEAL LREILDLKSK LDEGAESKIS VKKEAVKSQT DEKGNAKSDS 180 GANFDSFKEN RSSDSTDYSS AILSEEINNS PTAAISSSTE KVILHQSPHD EFLDIVDNMN 240 CSFQFSDTKA SILGDAHKAY MPQCVKIEEH TFFSSEESCS TFFSDDQAPT IYWYSSDEWN 300 *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	84	KKRRLNVDQVKALEKNFEVENKLEPDRKVK
2	103	111	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	5e-60	HD-ZIP family protein