PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu032241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 26293.5 Da PI: 8.9845 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 40 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l + v+++G ++W++I++++ gR++k+c++rw + Oeu032241.1 40 KGPWSAEEDKVLTRMVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 85 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.4 | 3.3e-18 | 94 | 136 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++t Ede +++a++++G++ W+tIar ++ gRt++ +k++w++ Oeu032241.1 94 PFSTAEDETILEAHAKYGNR-WATIARLLP-GRTDNAVKNHWNST 136 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MDSFYRCSYV TSSSSDSSSS ESSLSGSKTP RNFLKSERIK GPWSAEEDKV LTRMVERYGA 60 RNWSLISKYI KGRSGKSCRL RWCNQLSPTV EHRPFSTAED ETILEAHAKY GNRWATIARL 120 LPGRTDNAVK NHWNSTLKRK YLQKQVLEKS TYGTKNVSSG SRMCPVSDDF NEEYDPMTTL 180 SLAPPGLGAD VVAERPNDTF PTGFWDAMRN VIAREVRECV TMSFPESCSS GFH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 6e-58 | MYB family protein |