PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032035.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 400aa MW: 44167.5 Da PI: 8.4132

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032035.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.3e-05	74	93	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 C++Cgk F+++ +L H+r Oeu032035.1 74 ICKICGKNFRTNKSLFGHMR 93 5******************8 PP
2	zf-C2H2	16.2	3.1e-05	266	288	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C ksFs++ L H ++H Oeu032035.1 266 YICNTCRKSFSTPQALGGHRSSH 288 89**************9999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MKESAEEEDG PKVKDHCCLE CKKRFNSGKA LGGHMSSAHV QANRDFSLKK LKSKRRAKQV 60 SGLSSPSDYG GKIICKICGK NFRTNKSLFG HMRCHPDREW RGMEPPVEAA MNFLEPEFEV 120 VNGVPSRACE GDQIDSGPVV ASPPVNLNKS VKWQVTGKRG RAPTKPLIDS PPLRSSEEIL 180 AVQQLIRLVN GDSVKPIEDQ DSKLNESEAT SSNCWTSENE TDDVNQDFYL NKNKEKKSVD 240 PESQTSFSPT GPVSESVPLA VTPDKYICNT CRKSFSTPQA LGGHRSSHKK FKVKVYNTID 300 DQSSNEVSYA NYRPKANAIK QLEVNNVSRK AAFSLKAVYN TYVIGVQNQC HSTGECNHAD 360 RVTSTEETKK KHKVLLKFNL NEIPSQDGED VIESGDTAS*

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MKESAEEEDG PKVKDHCCLE CKKRFNSGKA LGGHMSSAHV QANRDFSLKK LKSKRRAKQV  60
SGLSSPSDYG GKIICKICGK NFRTNKSLFG HMRCHPDREW RGMEPPVEAA MNFLEPEFEV  120
VNGVPSRACE GDQIDSGPVV ASPPVNLNKS VKWQVTGKRG RAPTKPLIDS PPLRSSEEIL  180
AVQQLIRLVN GDSVKPIEDQ DSKLNESEAT SSNCWTSENE TDDVNQDFYL NKNKEKKSVD  240
PESQTSFSPT GPVSESVPLA VTPDKYICNT CRKSFSTPQA LGGHRSSHKK FKVKVYNTID  300
DQSSNEVSYA NYRPKANAIK QLEVNNVSRK AAFSLKAVYN TYVIGVQNQC HSTGECNHAD  360
RVTSTEETKK KHKVLLKFNL NEIPSQDGED VIESGDTAS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	8e-24	C2H2 family protein