PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu030310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 294aa MW: 32771.9 Da PI: 4.7959 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.4 | 8.9e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W++ ++ g+ R++k+c++rw +yl Oeu030310.1 14 KGPWTAEEDKKLINFILTNGQCCWRALPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.7e-15 | 72 | 111 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++ +d++ +lG++ W++Ia+ ++ gRt++++k++w+++ Oeu030310.1 72 EFEEKMVIDLHSKLGNR-WSKIASNLP-GRTDNEIKNHWNTH 111 5699*************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL TNGQCCWRAL PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEFEEKMVID LHSKLGNRWS KIASNLPGRT DNEIKNHWNT HVKKKLRKMG 120 IDPFTHKPLP TTTTIQLPDN EQAGGPKPTP QQSEVADQDK EEAVVVETPL QSTINDQAKD 180 GDKSIHAGLF DSMEVNNDFC IDEIPLIEPH EILITCENSS SSPSSSSSSS SSSTDTSVGG 240 RFLSNLLEDL EFATTFDYNE IISSIWDDDF ISSLDLYNNC DDNSNIMVEP PLL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 3e-90 | MYB family protein |