PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029350.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WOX

Protein Properties

Length: 211aa MW: 23307 Da PI: 6.6654

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029350.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.7	4e-08	4	40	25	57
--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 25 psaeereeLAkkl....gLterqVkvWFqNrRakekk 57 p +ee ++ k l + +++V++WFqNrR + ++ Oeu029350.1 4 PPKEETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 40 556666666666666678899*************997 PP
2	Wus_type_Homeobox	62.8	7e-21	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+kee+ ri++ Le++G+++d+NVfyWFQNr++R+r++q Oeu029350.1 1 MVNPPKEETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MVNPPKEETV RIRKLLEKFG AVGDANVFYW FQNRRSRSRR RQRQIQASLS GGDQPQTQPW 60 SGCCGATQYE STTAASSVPS LYNFPLTSSS GIYGTSSSCT ENDASDDMFS LSGFREIDQN 120 PSVQLTFCPS DTSHLPYQSG LITVFINGVA TEVPRGPLDM KAMFGQNFML FHSSGVPVQV 180 NGHGFLMQSL QHGDSYFLVP RHSEDILKFE *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	2e-40	WOX family protein