PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029225.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 383aa MW: 43025.8 Da PI: 4.4956

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029225.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.6	9.3e-11	25	78	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 rW t+E++ll+ av+++G+++W+++a++++ + +t+ +ck ++++++ Oeu029225.1 25 RWGTWEELLLAFAVNRYGTDRWDSVASELQkrsseptpTLLTPQNCKQKYLDLK 78 9***********************************99********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAKLEGTVPN NFDKPESEGD DETHRWGTWE ELLLAFAVNR YGTDRWDSVA SELQKRSSEP 60 TPTLLTPQNC KQKYLDLKRR YLTQNDNVNN KLLNDDNVDG DNSKGSVPLL EELRKLRVAE 120 LRREVQRYDL NIESLELKMK RMEEEREGSL RSVKNSDENS DLEKKGEEKR KDDEVEPDEN 180 AWPQSMAGEP VIGNESEKDH MSVNESNSTD LDGEKLRTGD KESEPDRTGD FQGKRDRTGE 240 GREEPVDLKA DSDRTGEGKP VREESCNGSS DSIEKDPVRE VKVERASDSV GLVDSEAESK 300 GGGDEAARES SDVQSTASRS KEENDKIHRG SLSGDERDHV DQSGTLKDLP VASQPLLDFL 360 HNLRAHKSGS VFERRLQSQV II*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAKLEGTVPN NFDKPESEGD DETHRWGTWE ELLLAFAVNR YGTDRWDSVA SELQKRSSEP  60
TPTLLTPQNC KQKYLDLKRR YLTQNDNVNN KLLNDDNVDG DNSKGSVPLL EELRKLRVAE  120
LRREVQRYDL NIESLELKMK RMEEEREGSL RSVKNSDENS DLEKKGEEKR KDDEVEPDEN  180
AWPQSMAGEP VIGNESEKDH MSVNESNSTD LDGEKLRTGD KESEPDRTGD FQGKRDRTGE  240
GREEPVDLKA DSDRTGEGKP VREESCNGSS DSIEKDPVRE VKVERASDSV GLVDSEAESK  300
GGGDEAARES SDVQSTASRS KEENDKIHRG SLSGDERDHV DQSGTLKDLP VASQPLLDFL  360
HNLRAHKSGS VFERRLQSQV II*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-32	MYB_related family protein