PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029062.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 733aa MW: 82796 Da PI: 6.9298

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029062.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	23.3	2e-07	389	530	44	116
TCP 44 dsktieWLlqqakpaikeltgt.........................................ssssasec...eaesssssasnsssg......... 88 sktieWLl +p+i+++t+ s++s+ ++ + ++++++ Oeu029062.1 389 HSKTIEWLLHHMEPSIIAATNAdyanhdrgpslpplphhdkafahivhrqfglnlalpfdchvSTPSSAKAlmlS-------RGQPNQEndasvqaly 479 69********************99999999999999999999999999999998888888776444443332221.......1111111223345566 PP TCP 89 ............kaaksaakskksqksaasalnlak.esr..........a 116 + +++++++ +++ +a+ ++ s Oeu029062.1 480 ngftgflcqtsyQTQNFHHPQDQNSGGPAAEAAPPStASGsvggggaagqP 530 777778777766555555533333333332222222122255665544333 PP
2	HLH	33.9	5.6e-11	545	590	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq Oeu029062.1 545 HSIAERLRRERIAKRMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 590 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MRKTQGKYIV ETMNLINTLE RLGISYHFED EIEELLEHSF NLNLDYVDEA YDLYTVALHF 60 RLFRQHGYRK SCSIFEKFID ENEKFKEIIK SDARGLLNLY EAAYLRVYVT HALVQSIHFG 120 NPRIEARNFI SIYEQYESKD ELLLRFAKLD YNSLQTSCTK WWKELDLVSM LPYARDKVVE 180 NFFWAMGVYH EPEYSVARVI LTKTIAMTSI IDGTYDAYGT VDELEIFTEA IQRWDISEID 240 WLPEYIKPFY SALLNLYDQF DEELSKEGRS YALYYAKEAL KELVRTYYVE AKWFIEGYLP 300 PFFGYMNNAL ITCTYCYHTS TALLGMKFVT KEEFEWLSSR PKMLVASLRR CRLIDDIATY 360 KRQTPPSLGS TTKTNGGLQL KKPPVKDCHS KTIEWLLHHM EPSIIAATNA DYANHDRGPS 420 LPPLPHHDKA FAHIVHRQFG LNLALPFDCH VSTPSSAKAL MLSRGQPNQE NDASVQALYN 480 GFTGFLCQTS YQTQNFHHPQ DQNSGGPAAE AAPPSTASGS VGGGGAAGQP RQRVRARRGQ 540 ATDPHSIAER LRRERIAKRM KGLQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSMSR 600 LGSATGIPQS SPVHGTLSKG RSGNEKQTTP LITADHHVTK LLEEDMGSAM QYLQGKGLCL 660 MPISLATAIS TATCRSRNPM DSININTNNQ LVNGDESCST SSPGMSALTV QSATIAISAE 720 KNQENKNNLT PF*

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MRKTQGKYIV ETMNLINTLE RLGISYHFED EIEELLEHSF NLNLDYVDEA YDLYTVALHF  60
RLFRQHGYRK SCSIFEKFID ENEKFKEIIK SDARGLLNLY EAAYLRVYVT HALVQSIHFG  120
NPRIEARNFI SIYEQYESKD ELLLRFAKLD YNSLQTSCTK WWKELDLVSM LPYARDKVVE  180
NFFWAMGVYH EPEYSVARVI LTKTIAMTSI IDGTYDAYGT VDELEIFTEA IQRWDISEID  240
WLPEYIKPFY SALLNLYDQF DEELSKEGRS YALYYAKEAL KELVRTYYVE AKWFIEGYLP  300
PFFGYMNNAL ITCTYCYHTS TALLGMKFVT KEEFEWLSSR PKMLVASLRR CRLIDDIATY  360
KRQTPPSLGS TTKTNGGLQL KKPPVKDCHS KTIEWLLHHM EPSIIAATNA DYANHDRGPS  420
LPPLPHHDKA FAHIVHRQFG LNLALPFDCH VSTPSSAKAL MLSRGQPNQE NDASVQALYN  480
GFTGFLCQTS YQTQNFHHPQ DQNSGGPAAE AAPPSTASGS VGGGGAAGQP RQRVRARRGQ  540
ATDPHSIAER LRRERIAKRM KGLQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSMSR  600
LGSATGIPQS SPVHGTLSKG RSGNEKQTTP LITADHHVTK LLEEDMGSAM QYLQGKGLCL  660
MPISLATAIS TATCRSRNPM DSININTNNQ LVNGDESCST SSPGMSALTV QSATIAISAE  720
KNQENKNNLT PF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	550	555	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-62	bHLH family protein