PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu026673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 211aa MW: 24049.2 Da PI: 9.937 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00017 | 73 | 95 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H Oeu026673.1 73 FECQYCFKNFANSQALGGHQNAH 95 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MKKKVKLFGF ELDSCRKRKE ISEGDESVNS SSSSTVTSGR EKPALEKGEN EKFNNEISLV 60 PDKLGVDQEK KKFECQYCFK NFANSQALGG HQNAHKKERM KKKRLQLQER KGNMINYYKK 120 IQPFQNSNYR GSSAWLYDPS CHAPAEFTLY EESQISFDPY QTRVFSLKCP VDNKSRDRST 180 RPVVIKQPSS SPNSKSDCKS LDLKLGLSLI * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 2 | 19 | KKKVKLFGFELDSCRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58070.1 | 2e-14 | C2H2 family protein |