PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025072.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 300aa MW: 31407.8 Da PI: 10.3141

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025072.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.1	1.3e-37	48	144	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsssg.. 88 ++++++++++hTkv+gR+RR+R+sa+caar+F+L++eLG+++d++ti WLl+qa+p+i+++tgt++++a ++ + ss+ Oeu025072.1 48 PPRRSSTKDRHTKVEGRGRRIRMSATCAARVFQLTRELGHKSDGETIRWLLEQAEPSIIAATGTGTIPAIAMsvngalkipT--------T--SSTaa 135 5799************************************************************999994442212122111........1..11111 PP TCP 89 ........k 89 + Oeu025072.1 136 tvakddggQ 144 221111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MSTPTSIPLI TLREEDHDME EKPTFPPIGL APKPPQTVQP PAPAVELPPR RSSTKDRHTK 60 VEGRGRRIRM SATCAARVFQ LTRELGHKSD GETIRWLLEQ AEPSIIAATG TGTIPAIAMS 120 VNGALKIPTT SSTAATVAKD DGGQTDRKRK RPTNSEFVDV KTLSNKISDT NNSLTTANPA 180 IISTNSTISA PLLSTVPTPA HALVPMITMW AIPAAPPNAN ANASPTFLII PQAAQNGHPL 240 VNISAAAGPI STVFAAVQPG GASIARPPPA TEVNLQSLPS SSPAGCTTVI EKSQQRLRC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	4e-49	TCP family protein