PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024889.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 357aa MW: 38102.9 Da PI: 8.73

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024889.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.9	1.8e-38	70	170	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+p+i ++tgt++++a+++ ++s +s + + s++ Oeu024889.1 70 AAKKPSKDRHTKVDGRGRRIRMPAVCAARVFQLTKELGHKSDGETIEWLLQQAEPSIVAATGTGTIPANFStLNVSLRSRGTTISASpskseplffga 167 5799****************************************************************998766666655552222223333344444 PP TCP 89 ..k 89 Oeu024889.1 168 ttG 170 440 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MESHTKNQGS NSGSHEPDFL RLVSHHQQSQ PNPGQAPTVH RHSTTTTSSS TIPTNTANNT 60 DNNNNKNDSA AKKPSKDRHT KVDGRGRRIR MPAVCAARVF QLTKELGHKS DGETIEWLLQ 120 QAEPSIVAAT GTGTIPANFS TLNVSLRSRG TTISASPSKS EPLFFGATTG MLGFHHQLTS 180 NGGGFGQYLD AATSHSEDKP RRTIMKDHEP GSQTKPGSSQ SSSFIQAPAV WAVAPATANV 240 GNAFWMLPVT GGTAMAPVGA GQQEHPFWQY KPSPNQRIDG FEFSGGGNRF NPGSMVVQNP 300 SPSVQQLGLV SDSTNMGLLA SINAYSNCNS RIDLGMNLQQ NQQQDNVSDD ENPKNS*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MESHTKNQGS NSGSHEPDFL RLVSHHQQSQ PNPGQAPTVH RHSTTTTSSS TIPTNTANNT  60
DNNNNKNDSA AKKPSKDRHT KVDGRGRRIR MPAVCAARVF QLTKELGHKS DGETIEWLLQ  120
QAEPSIVAAT GTGTIPANFS TLNVSLRSRG TTISASPSKS EPLFFGATTG MLGFHHQLTS  180
NGGGFGQYLD AATSHSEDKP RRTIMKDHEP GSQTKPGSSQ SSSFIQAPAV WAVAPATANV  240
GNAFWMLPVT GGTAMAPVGA GQQEHPFWQY KPSPNQRIDG FEFSGGGNRF NPGSMVVQNP  300
SPSVQQLGLV SDSTNMGLLA SINAYSNCNS RIDLGMNLQQ NQQQDNVSDD ENPKNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-51	TCP family protein