PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024864.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 265aa MW: 30079 Da PI: 4.3668

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024864.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.3	6.4e-19	40	93	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t +q+e Le+ F +++++ e++ +LAk+lgL+ +q+ +WFqNrRa++k Oeu024864.1 40 KKRRLTVDQVEFLERSFDAENTLKPERKIQLAKELGLQSQQIAIWFQNRRARWK 93 56689************************************************9 PP
2	HD-ZIP_I/II	114.8	5.1e-37	39	129	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ +qv++LE+sF++e++L+perK +la+eLglq +q+a+WFqnrRAR+k kqlE d+e+L ++y+++k + ++L ke+e+L++e+ Oeu024864.1 39 EKKRRLTVDQVEFLERSFDAENTLKPERKIQLAKELGLQSQQIAIWFQNRRARWKIKQLEIDFETLEASYNRMKIDYDNLLKENEKLKAEV 129 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MVSFGGTAGP CNSASLTVHP YDPEDNGYKY LDEYFNQPEK KRRLTVDQVE FLERSFDAEN 60 TLKPERKIQL AKELGLQSQQ IAIWFQNRRA RWKIKQLEID FETLEASYNR MKIDYDNLLK 120 ENEKLKAEVL VLAENVLVGD QGDGNSLLSD NQKLPEGSRK SVADTISEDE ESKVSRVALK 180 SEDMSSARSD AIDSRHNADG IHSSYSFEPD NSDLSQSEDN WNEELLRPAY AFSKIDDADY 240 LGVSANSYYF GFPIEDHAFG FWSN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	96	RRARWKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	5e-34	HD-ZIP family protein