PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024323.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 292aa    MW: 32181.2 Da    PI: 7.431
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024323.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-08956347
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                      W+ eE++ + +a++++  +    +W++I+ +++  +  +++k+++q +
      Oeu024323.1  9 VWSREEEKSFENAIAMHWIEdskdQWDKISLMVP-SKNTEELKHHYQLL 56
                     6****************9999999**********.***********965 PP
2Myb_DNA-binding41.43.4e-13132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
      Oeu024323.1 132 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVVSRTPTQVASHAQKY 176
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MSVSCSPVVW SREEEKSFEN AIAMHWIEDS KDQWDKISLM VPSKNTEELK HHYQLLVEDV  60
NAIEAGHVPL PNYIGEETSS SIKDHHQGMR HGTYSIGESH CGFSGLGHDS TSTGVACKAG  120
SRADQERRKG IPWTEEEHRL FLLGLDKFGK GDWRSISRNF VVSRTPTQVA SHAQKYFIRL  180
NSMNRDRRRS SIHDITTVNG DAASHLAPVT GQQTNPIPLN VAALSPAMKH RNQPNMHGLG  240
MYGVGHPIGA APGHIESAVG TPVMITPGHH HPPYVVPMAY HMPPPPPSMH Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.12e-79MYB family protein