PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024226.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 309aa    MW: 34716.1 Da    PI: 8.3992
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024226.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.5e-163077148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd++l+d +++ G  tW   ++  g++R++k+c++rw +yl
      Oeu024226.1 30 RGTWTPEEDKILIDFIRENGHVTWQELPELAGLNRCGKSCRLRWTNYL 77
                     89******************99************************97 PP
2Myb_DNA-binding39.31.5e-1283128148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++ eE+  + ++++  G++ W+ Ia+ ++ gRt++++k++w+++l
      Oeu024226.1  83 RGTFSLEEEYTISRLHAAIGSK-WSIIAANLP-GRTDNDIKNYWNSHL 128
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAKKNEKKVE EVEKKQHMRR PCCVKDRVRR GTWTPEEDKI LIDFIRENGH VTWQELPELA  60
GLNRCGKSCR LRWTNYLRPD IKRGTFSLEE EYTISRLHAA IGSKWSIIAA NLPGRTDNDI  120
KNYWNSHLRR RFDSIQSHQP SSSISVGMHS KSAPARHKAE WECVRLEAEA RLPKNPVLPN  180
PPSMANSGGD FFLRMWNSEV GKSFHNFKAR IGECSGTKTG SPVSQTSSMT KVDSGSCSGV  240
TMNAVHCKNL GSTDMTGQQH MGSTSSYKEA DVMAAYSNST ETYDLDDSEA MWNMLLEFSD  300
TGNDLGFL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.17e-70MYB family protein