PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu024186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 159aa MW: 17943.1 Da PI: 5.4056 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 89 | 141 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ ++tkeq +Lee F+++++++ +++ LA++l+L rqV vWFqNrRa+ Oeu024186.1 89 RKKLRLTKEQGAVLEETFNEQNTLTPKQKLTLANQLNLRPRQVEVWFQNRRAR 141 678899**********************************************8 PP | |||||||
2 | HD-ZIP_I/II | 79.2 | 6.4e-26 | 89 | 142 | 1 | 54 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rl+keq ++LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRAR Oeu024186.1 89 RKKLRLTKEQGAVLEETFNEQNTLTPKQKLTLANQLNLRPRQVEVWFQNRRARL 142 69***************************************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MQRQNQKSST ADPFQLSADR HVEGRSFLRG IDMNKPITLT DLEEEVMVSS PNSTVSSLSE 60 KRSEREENEA ERASSSMEVD EDGGDATGRK KLRLTKEQGA VLEETFNEQN TLTPKQKLTL 120 ANQLNLRPRQ VEVWFQNRRA RLVIFGALSR VLLSFTEC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60390.1 | 2e-26 | HD-ZIP family protein |