PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu023841.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 224aa MW: 24500.1 Da PI: 9.7382 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00087 | 63 | 85 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k + ++ L H++ H Oeu023841.1 63 FSCRYCQKKYYSSQALGGHQNAH 85 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDEQDQNQDN NRNTNLVLDL NLSSKDFDQN SGLELNLFDK NPSQNPSNID PSPQGNESEP 60 RVFSCRYCQK KYYSSQALGG HQNAHKRERT IAKRGPRFGG AASLNQYRYS SMGLLPQHGS 120 LNRSLAIQAH STIHKPSLLA PSTIYGQYGG SRKPLDQQPA IGRLAMENHH VGGSSSGGAA 180 RFDSVQKFSS VVNGIGGLRW DSAGPPIKTN QEEHKKLDLS LKL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 6e-36 | C2H2 family protein |