PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu023526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HB-other | ||||||||
Protein Properties | Length: 107aa MW: 12363 Da PI: 10.5685 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 14.6 | 5.8e-05 | 27 | 83 | 1 | 52 |
TT--SS--HHHHHHHHHHHH....H.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFe....k.nrypsaeereeLAkklgLterqVkvWFqNrR 52 +r Rt+ft++q e + ++ e k +r+ +++e+e+ k +g++ ++ kvW +N++ Oeu023526.1 27 KRIRTKFTEDQKEKMLAFAEklgwKlQRKDKEDEIERFCKGVGISRKVFKVWMHNHK 83 688***********9876556666349999999***********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence |
MVEYGGGTGC GRRQIPESPE SERSGKKRIR TKFTEDQKEK MLAFAEKLGW KLQRKDKEDE 60 IERFCKGVGI SRKVFKVWMH NHKNSFFTSA SNANVSNPTH QWRETK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75240.1 | 6e-24 | ZF-HD family protein |