PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023470.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 1161aa MW: 128445 Da PI: 8.6835

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023470.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	1044	1069	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C+ C++sF +k +Lk H r+ + Oeu023470.1 1044 YPCNmeGCNMSFGSKQELKLHKRNiC 1069 89********************9877 PP
2	zf-C2H2	13.3	0.00025	1069	1091	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H Oeu023470.1 1069 CPvkGCGKKFFSHKYLVQHRRVH 1091 9999*****************99 PP
3	zf-C2H2	12.6	0.00041	1127	1153	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H Oeu023470.1 1127 YVCTeaGCGQTFRFVSDFSRHKRKtgH 1153 99********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1161 aa Download sequence
MAGVEASGGN IEVFPWLKSL PVAPEYYPTL AEFQDPIAYI FKIEKEASKY GICKIVPPVP 60 APSKKTAIAN LNNSLLARSN DSNPAPTFTT RQQQIGFCPR KNRPVQKPVW QSGENYTVSE 120 FEAKAKSFEK SYLKKYGKKG LNALEIETLY WNATVDKPFS VEYANDMPGS AFVVKKVGGK 180 GNEGPLTVGE TEWNMRGVSR AKCSLLRFMK EEIPGVTSPM VYIAMMFSWF AWHVEDHDLH 240 SLNYMHVGAG KTWYGVPREA AVAFEEVIRV QGYGGEINPL VTFATLGEKT TVMSPEVLVN 300 AGVPCCRLVQ NAGEFVVTFP RAYHSGFSHG FNCGEAANIA TPEWLRIAKD AAIRRASINC 360 SPMVSHFQLL YDLALSLCSS LPKSICVEPR SSRLKDRKKS EGEMLIKELF SQDVMQNNNT 420 LHILGKGSAV IVLPQNSLSS SNLRGYPVKG KVYSLCNGNK LPSLAPQAGS ADSDMKRASQ 480 FDRLSEQGLF SCVTCGILCF ACVAIVQPTE AAARYLLSAD CNIFDDWEAA GNGYNPRIGD 540 VQACVVNTHS GSVLKKTPAG LFDVTISSAA QIETLDDDST TVVSNSKTQK DTSALSLLAL 600 MYDESSDSEE EEFEVHIPVK DPESKGSDCS EDYSDEFETD NCKLVDLNSL THSFRNFTKL 660 QNGASSCNPV ASKDEATIST ALVPLEMTTT SFAPKSDEES SRMHVFCLQH AVQVEQRLST 720 FGGAHVFLVC HPDYPKLESQ AKKVAEELKI DYLWNDTPFR EATEKDEEMI RLALDSEDAI 780 HGIGDWAVKL GINLYYSASL SRSPLYSKQM PYNAVVYNAF GRSSPADTRE SDGKGSGKQR 840 RFAVAGKWCG KVWMSSQVHP LLTNNPEEQE LEKSNPSRVE PDVNLGRPLD ASRTSEAAST 900 SCKTSRKRKS RAENRSALKA KSLMAETPEE PSKESPAWNI LKQARIKSKL GNKQMKKATP 960 EPHNTRESSK KQSDSLIDSE LEGWPGTRLR KRTSKPGKDS GTNSAKARSI PKMQNKNMIM 1020 KKGQATKVLA SGSNAKTKDE EMEYPCNMEG CNMSFGSKQE LKLHKRNICP VKGCGKKFFS 1080 HKYLVQHRRV HMDDRPLKCP WKGCKMTFKW AWARTEHIRV HTGARPYVCT EAGCGQTFRF 1140 VSDFSRHKRK TGHSSKKSKG *

Sequence ? help Back to Top

Protein Sequence Length: 1161 aa Download sequence

MAGVEASGGN IEVFPWLKSL PVAPEYYPTL AEFQDPIAYI FKIEKEASKY GICKIVPPVP  60
APSKKTAIAN LNNSLLARSN DSNPAPTFTT RQQQIGFCPR KNRPVQKPVW QSGENYTVSE  120
FEAKAKSFEK SYLKKYGKKG LNALEIETLY WNATVDKPFS VEYANDMPGS AFVVKKVGGK  180
GNEGPLTVGE TEWNMRGVSR AKCSLLRFMK EEIPGVTSPM VYIAMMFSWF AWHVEDHDLH  240
SLNYMHVGAG KTWYGVPREA AVAFEEVIRV QGYGGEINPL VTFATLGEKT TVMSPEVLVN  300
AGVPCCRLVQ NAGEFVVTFP RAYHSGFSHG FNCGEAANIA TPEWLRIAKD AAIRRASINC  360
SPMVSHFQLL YDLALSLCSS LPKSICVEPR SSRLKDRKKS EGEMLIKELF SQDVMQNNNT  420
LHILGKGSAV IVLPQNSLSS SNLRGYPVKG KVYSLCNGNK LPSLAPQAGS ADSDMKRASQ  480
FDRLSEQGLF SCVTCGILCF ACVAIVQPTE AAARYLLSAD CNIFDDWEAA GNGYNPRIGD  540
VQACVVNTHS GSVLKKTPAG LFDVTISSAA QIETLDDDST TVVSNSKTQK DTSALSLLAL  600
MYDESSDSEE EEFEVHIPVK DPESKGSDCS EDYSDEFETD NCKLVDLNSL THSFRNFTKL  660
QNGASSCNPV ASKDEATIST ALVPLEMTTT SFAPKSDEES SRMHVFCLQH AVQVEQRLST  720
FGGAHVFLVC HPDYPKLESQ AKKVAEELKI DYLWNDTPFR EATEKDEEMI RLALDSEDAI  780
HGIGDWAVKL GINLYYSASL SRSPLYSKQM PYNAVVYNAF GRSSPADTRE SDGKGSGKQR  840
RFAVAGKWCG KVWMSSQVHP LLTNNPEEQE LEKSNPSRVE PDVNLGRPLD ASRTSEAAST  900
SCKTSRKRKS RAENRSALKA KSLMAETPEE PSKESPAWNI LKQARIKSKL GNKQMKKATP  960
EPHNTRESSK KQSDSLIDSE LEGWPGTRLR KRTSKPGKDS GTNSAKARSI PKMQNKNMIM  1020
KKGQATKVLA SGSNAKTKDE EMEYPCNMEG CNMSFGSKQE LKLHKRNICP VKGCGKKFFS  1080
HKYLVQHRRV HMDDRPLKCP WKGCKMTFKW AWARTEHIRV HTGARPYVCT EAGCGQTFRF  1140
VSDFSRHKRK TGHSSKKSKG *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	905	910	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein