PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023005.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 469aa MW: 54255.3 Da PI: 8.8246

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023005.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.4	2.8e-06	62	83	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H Oeu023005.1 62 TCEECGACFKKPAHLKQHMQSH 83 6*******************99 PP
2	zf-C2H2	14.9	7.7e-05	177	201	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ +++rk++L rH+ H Oeu023005.1 177 FTCPvdDCHSCYRRKDHLARHLLQH 201 89*******************9887 PP
3	zf-C2H2	18.5	5.4e-06	206	231	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp dC+++F +sn+krH + H Oeu023005.1 206 FECPmeDCKRRFAFQSNMKRHVKEnH 231 89********************9988 PP
4	zf-C2H2	17	1.6e-05	247	269	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk F+ +s L++H +H Oeu023005.1 247 CSeiGCGKAFKYPSKLRKHEDSH 269 88889**************9888 PP
5	zf-C2H2	15.2	6.1e-05	336	360	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +Fs++snLk+Hi+ H Oeu023005.1 336 KCSfdGCVHTFSNRSNLKQHIKAvH 360 688889***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MGIEQDGREV IFRDIRRYYC EYCGIFRSKK SLISSHILLQ HKEEIKEKEQ QEEIKEGKQM 60 NTCEECGACF KKPAHLKQHM QSHFLEHWIH RKELQNAGGS SITLNGSVPG GGPPVKLHQK 120 RTPKCKRWQQ YLEWISTGWG TTCEAPSSEP RSRLYFFELK SILTGRLYQN SVLMRPFTCP 180 VDDCHSCYRR KDHLARHLLQ HQGTLFECPM EDCKRRFAFQ SNMKRHVKEN HCESSSVNAE 240 HSKKYLCSEI GCGKAFKYPS KLRKHEDSHI KLDTVEALCS EPGCMKYFTN KHFLKEHFLS 300 CHQYIACEIC GTRQLKKNIK RHLRAHEVGV SLDRIKCSFD GCVHTFSNRS NLKQHIKAVH 360 LDLKPFTCGI PGCGKKFAFK HVRDNHEKSG CHVYSQGNFE ESDEQFRLIS RGGRKRKCPV 420 IETLLRKKVT PPSESDPMMC EGPEYLSWLL NAESENLAMG DALFTSMY*

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MGIEQDGREV IFRDIRRYYC EYCGIFRSKK SLISSHILLQ HKEEIKEKEQ QEEIKEGKQM  60
NTCEECGACF KKPAHLKQHM QSHFLEHWIH RKELQNAGGS SITLNGSVPG GGPPVKLHQK  120
RTPKCKRWQQ YLEWISTGWG TTCEAPSSEP RSRLYFFELK SILTGRLYQN SVLMRPFTCP  180
VDDCHSCYRR KDHLARHLLQ HQGTLFECPM EDCKRRFAFQ SNMKRHVKEN HCESSSVNAE  240
HSKKYLCSEI GCGKAFKYPS KLRKHEDSHI KLDTVEALCS EPGCMKYFTN KHFLKEHFLS  300
CHQYIACEIC GTRQLKKNIK RHLRAHEVGV SLDRIKCSFD GCVHTFSNRS NLKQHIKAVH  360
LDLKPFTCGI PGCGKKFAFK HVRDNHEKSG CHVYSQGNFE ESDEQFRLIS RGGRKRKCPV  420
IETLLRKKVT PPSESDPMMC EGPEYLSWLL NAESENLAMG DALFTSMY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-102	C2H2 family protein