PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu022534.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 160aa MW: 18513.4 Da PI: 9.9124 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.5 | 9.6e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+l+ +ss Oeu022534.1 9 KRIENESSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLFQFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 55.1 | 3.2e-19 | 77 | 147 | 3 | 73 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnell 73 +++++++e ++ ++l++e a + k+ie L++++R+llG++L+++s++eLq + +qLekslk+iR++K l Oeu022534.1 77 ETTTNNTEVRHVQHLKNEEAFMTKKIELLESSKRKLLGQGLGTCSVEELQDIDSQLEKSLKNIRARKVLWL 147 45566689999********************************************************7655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MVRGKIQMKR IENESSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLFQFSSS 60 NMENTIEKYL EHAKEKETTT NNTEVRHVQH LKNEEAFMTK KIELLESSKR KLLGQGLGTC 120 SVEELQDIDS QLEKSLKNIR ARKVLWLNSL LELRFYSNC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 6e-65 | MIKC_MADS family protein |