PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022011.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 422aa MW: 46091.5 Da PI: 5.7148

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022011.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.3	3.6e-10	265	313	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq Oeu022011.1 265 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 313 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MDSEDNVGRR FQQRKGDSIL NCPSSGIVEN SIYEKVPGTG MSSESMFKMR NGVDHFYGSG 60 WDTIVSLNPS GNFGGSSVVP RNEFPDSNYS VVLENQTVNF PSESGLVDMM PKIPSFGSGS 120 YPEMVSSFPV TECGPITGTI RHPTYARNNV SGFEMALTNV ADSQEHCQNS EDGVVGVSPN 180 GKRKRKVSMG ASPKNIEVEC QKDPPEDISE FPNEEYDKKQ KFEQNAGANL RNKQVVKQAK 240 DSSTTAEPSK ENYIHVRAKR GQATNSHSLA ERVRRERISE RMRLLQELVP GCNKITGKAV 300 MLDEIINYVQ SLQQQVEFLS MKLATVNPEL DTDIDRILSK DILQFRGNNP AALGIGSGLS 360 SSHPFPGFSP GTFGVPGANP PYHPLPQALW NNDLQSILQM GFDANPPSSN LGPNGPSKME 420 L*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MDSEDNVGRR FQQRKGDSIL NCPSSGIVEN SIYEKVPGTG MSSESMFKMR NGVDHFYGSG  60
WDTIVSLNPS GNFGGSSVVP RNEFPDSNYS VVLENQTVNF PSESGLVDMM PKIPSFGSGS  120
YPEMVSSFPV TECGPITGTI RHPTYARNNV SGFEMALTNV ADSQEHCQNS EDGVVGVSPN  180
GKRKRKVSMG ASPKNIEVEC QKDPPEDISE FPNEEYDKKQ KFEQNAGANL RNKQVVKQAK  240
DSSTTAEPSK ENYIHVRAKR GQATNSHSLA ERVRRERISE RMRLLQELVP GCNKITGKAV  300
MLDEIINYVQ SLQQQVEFLS MKLATVNPEL DTDIDRILSK DILQFRGNNP AALGIGSGLS  360
SSHPFPGFSP GTFGVPGANP PYHPLPQALW NNDLQSILQM GFDANPPSSN LGPNGPSKME  420
L*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	221	KRKRKVSMGASPKNIEVECQKDPPEDISEFPNEEYDKKQK
2	183	222	KRKRKVSMGASPKNIEVECQKDPPEDISEFPNEEYDKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	3e-62	bHLH family protein