PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021561.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 494aa MW: 51910.8 Da PI: 8.3072

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021561.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu021561.2 53 FVCEICNKGFQRDQNLQLHRRGH 75 89*******************88 PP
2	zf-C2H2	11.8	0.00073	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + Oeu021561.2 129 WKCEKCSKNYAVQSDWKAHSKIC 151 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MNDSTASKDS SSGNQTAPPK STAKKTRNLP GMPDPEAEVI ALSPNTLLAT NRFVCEICNK 60 GFQRDQNLQL HRRGHNLPWK LRQRSSKEVK KKVYVCPEPG CIHHSPSRAL GDLTGIKKHF 120 CRKHGEKKWK CEKCSKNYAV QSDWKAHSKI CGSREYKCDC GTLFLRRDSF ITHRAFCDAL 180 SGECAKKNTA LAPPSTDEDP KIQTVMPSPS PPAVAAPSSP PLEQPPAPPP PPPLQASPSA 240 PPSTAVVSSV LPFQNLELPE SASHNLTTAR IFEEAPSVSD SPANCSSNSL SSSNAPRFPN 300 LFESMARSKQ TSDIALCTSS EPISLCLSMN QGPSIFKTAG QECMQYTPPP QPAMSATALL 360 QKAAQVGVAA SNASVLRGFG LVSSLSPSSE PQRWGRQEIE SEGASLVSGL GLGLGLACDG 420 GSALTELMLG TPSVFGPKHA TLDLLGLGMA ANGGSTGGLS AIMKSINEGL DVAAAAAAFG 480 GAEYSGQDMG RSS*

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MNDSTASKDS SSGNQTAPPK STAKKTRNLP GMPDPEAEVI ALSPNTLLAT NRFVCEICNK  60
GFQRDQNLQL HRRGHNLPWK LRQRSSKEVK KKVYVCPEPG CIHHSPSRAL GDLTGIKKHF  120
CRKHGEKKWK CEKCSKNYAV QSDWKAHSKI CGSREYKCDC GTLFLRRDSF ITHRAFCDAL  180
SGECAKKNTA LAPPSTDEDP KIQTVMPSPS PPAVAAPSSP PLEQPPAPPP PPPLQASPSA  240
PPSTAVVSSV LPFQNLELPE SASHNLTTAR IFEEAPSVSD SPANCSSNSL SSSNAPRFPN  300
LFESMARSKQ TSDIALCTSS EPISLCLSMN QGPSIFKTAG QECMQYTPPP QPAMSATALL  360
QKAAQVGVAA SNASVLRGFG LVSSLSPSSE PQRWGRQEIE SEGASLVSGL GLGLGLACDG  420
GSALTELMLG TPSVFGPKHA TLDLLGLGMA ANGGSTGGLS AIMKSINEGL DVAAAAAAFG  480
GAEYSGQDMG RSS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-118	C2H2 family protein