PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021366.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 274aa MW: 29053.2 Da PI: 8.1427

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021366.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H Oeu021366.1 112 YSCSVCNKTFPSYQALGGHKASH 134 99**********99999998887 PP
2	zf-C2H2	14.3	0.00012	175	197	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H Oeu021366.1 175 HECSICHKSFPTGQALGGHKRRH 197 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MALEALNSPA AAPTPGLKYD DVDRNLDSWT KGKRSKRSRS ENPPTDEEYL ALCLMMLARS 60 GGDGGRSAII SPSVNTANPA ATTVNLPTID DSKKQTENST TPPPPTTQNQ SYSCSVCNKT 120 FPSYQALGGH KASHRKNATA TASDDGNHST STSTTTASPI TASNVSALIP RGRLHECSIC 180 HKSFPTGQAL GGHKRRHYEG PIGGGSSKSG VTSSDGGASS HAPRDFDLNL PATPEFPLQL 240 TVDCEKKSQF LGEQEVESPM PFKKPRLPLF EER*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	1e-48	C2H2 family protein