PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021260.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 425aa MW: 44991.1 Da PI: 6.5113

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021260.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.8e-12	238	283	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq Oeu021260.2 238 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 283 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MNINSLLNQE QSLQEMHNHQ NGQPQMSSHF DPVSSHDDFL EQMMSSIPSS NSSFNWDVSS 60 VAGRADHAPP SSLLSQFDDQ SAQLVSKLRQ HQISSGATKA LMLQQQLLLS RRLAGNGLQS 120 PTGVSGGESG LLQMPISLNN NGDHTDVVDG SLQSANPAND TSMQSLFNGF TGSLGQTANQ 180 SQHFHHPQVF KYSMTQNFGA TAAPSMNQQA ASGSTGGGTP AQPRQRVRAR RGQATDPHSI 240 AERLRRERIA ERMKALQELV PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV 300 APLVADMSSE GRSSNGIQTA SSSDNNETMT VTEHQVAKLM EEDMGTAMQY LQGKGLCLMP 360 ISLATAISTA TCRSRNPIAT SNNPLLSGEA GGPSSPSMSV LTVQSAAIGG NGVVDASVKD 420 ATSV*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MNINSLLNQE QSLQEMHNHQ NGQPQMSSHF DPVSSHDDFL EQMMSSIPSS NSSFNWDVSS  60
VAGRADHAPP SSLLSQFDDQ SAQLVSKLRQ HQISSGATKA LMLQQQLLLS RRLAGNGLQS  120
PTGVSGGESG LLQMPISLNN NGDHTDVVDG SLQSANPAND TSMQSLFNGF TGSLGQTANQ  180
SQHFHHPQVF KYSMTQNFGA TAAPSMNQQA ASGSTGGGTP AQPRQRVRAR RGQATDPHSI  240
AERLRRERIA ERMKALQELV PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV  300
APLVADMSSE GRSSNGIQTA SSSDNNETMT VTEHQVAKLM EEDMGTAMQY LQGKGLCLMP  360
ISLATAISTA TCRSRNPIAT SNNPLLSGEA GGPSSPSMSV LTVQSAAIGG NGVVDASVKD  420
ATSV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	248	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	8e-63	bHLH family protein