PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu020776.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 435aa    MW: 48951.6 Da    PI: 4.8638
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu020776.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3121.3e-95614333374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL+ecA+a+s++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s+++ yk+l + ++++++ +++ +    f+evsP+ +f+h++ N 
  Oeu020776.1  61 RLLIECATAMSEKDSTKIHHLLWMLNELASPYGDCDQKLAFYFLQALFCKATDSGQRSYKTLISVAEKSHSFDSVRKLILKFQEVSPWTTFGHVASNG 158
                  79************************************************************8888775555555555555***************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvk 197
                  aIlea+ege+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+  +s  +  ++e+  r++kfA+ +gvpfef+v+   + l +l+ ++L v+
  Oeu020776.1 159 AILEALEGEKKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVVT-TSIVESVMKEVTPRMEKFARLMGVPFEFRVMnGLNFLGELTKDSLGVQ 255
                  *************************************************.66799*************************844557899********* PP

         GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  ++Ea+aVn++ +l+r+      +e+ r++++++++sl+Pkvv+vve+ead   ++++F++ f e+l++y+  fd+le++++++s+er ++Ere  +r+
  Oeu020776.1 256 EDEAIAVNCIGALKRVD-----VEE-RRAFIQMIQSLRPKVVTVVEEEADFssSRNDFVKCFEECLRFYTIYFDMLEESFAPTSNERLMLERE-CSRS 346
                  **************996.....555.88********************999545569************************************.89** PP

         GRAS 294 ivnvvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve....eesgslvlgWkdrpLvsvSaWr 374
                  iv+v+ac  +       er+e+ ++W+ +l+ea F pv +s+++++++++ll+++   g+++      ++  ++l+Wk++p+v++S+W+
  Oeu020776.1 347 IVSVLACDDEVdcagDSERRERGSQWSVKLREA-FVPVGYSDDVVDDVNALLKRYR-TGWSLVlpagADDVGIYLTWKEEPVVWASVWK 433
                  ******98754233368**************98.**********************.77777766777889999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MDRTNSVSSK EAAFLHVTNP QNNGIHLEMQ GTNCRQPQNS NITGLRSPDS GENSDGKWAS  60
RLLIECATAM SEKDSTKIHH LLWMLNELAS PYGDCDQKLA FYFLQALFCK ATDSGQRSYK  120
TLISVAEKSH SFDSVRKLIL KFQEVSPWTT FGHVASNGAI LEALEGEKKL HIIDISNTLC  180
TQWPTLLEAL ATRNDETPHL KLTVVVTTSI VESVMKEVTP RMEKFARLMG VPFEFRVMNG  240
LNFLGELTKD SLGVQEDEAI AVNCIGALKR VDVEERRAFI QMIQSLRPKV VTVVEEEADF  300
SSSRNDFVKC FEECLRFYTI YFDMLEESFA PTSNERLMLE RECSRSIVSV LACDDEVDCA  360
GDSERRERGS QWSVKLREAF VPVGYSDDVV DDVNALLKRY RTGWSLVLPA GADDVGIYLT  420
WKEEPVVWAS VWKP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-139GRAS family protein