PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020219.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 346aa MW: 38032.2 Da PI: 10.0447

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020219.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.2e-19	14	59	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd ll ++v+++G+++W++I++ ++ gR++k+c++rw + Oeu020219.1 14 KGPWSPEEDALLQRLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59 79****************************.*********985 PP
2	Myb_DNA-binding	56.7	5.5e-18	68	110	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde++++a++++G++ W+tI+r + gRt++ +k++w++ Oeu020219.1 68 AFTPEEDEKIIRAHAKFGNK-WATISRLLS-GRTDNAIKNHWNST 110 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAVLSQTKEM DRIKGPWSPE EDALLQRLVE KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60 SPEVQHRAFT PEEDEKIIRA HAKFGNKWAT ISRLLSGRTD NAIKNHWNST LKRKCFSMCE 120 EFNNFEPETQ QPLKRSSSVG PGTVISNSGL NFDPSSPSGS DLSESSLSGH QIYRPIARTG 180 GISPPHPTPS QPDLLTSLSL SLPGSGSNSK PVLESFPPQM KPVSDPTPKP SREPDRKSGS 240 TMHHTQIIQS PAPPVQASQM TLAPPPPLSQ QFTAAAKPAV GEVAMPSQVD ADKQFFSPEF 300 LATLQEMIRK EVRNYMAGIE PNRFLMQTDA IRNAVVKRIG ISKID*

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAVLSQTKEM DRIKGPWSPE EDALLQRLVE KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL  60
SPEVQHRAFT PEEDEKIIRA HAKFGNKWAT ISRLLSGRTD NAIKNHWNST LKRKCFSMCE  120
EFNNFEPETQ QPLKRSSSVG PGTVISNSGL NFDPSSPSGS DLSESSLSGH QIYRPIARTG  180
GISPPHPTPS QPDLLTSLSL SLPGSGSNSK PVLESFPPQM KPVSDPTPKP SREPDRKSGS  240
TMHHTQIIQS PAPPVQASQM TLAPPPPLSQ QFTAAAKPAV GEVAMPSQVD ADKQFFSPEF  300
LATLQEMIRK EVRNYMAGIE PNRFLMQTDA IRNAVVKRIG ISKID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-72	MYB family protein