PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu020087.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 190aa MW: 21715.3 Da PI: 10.8456 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.8e-14 | 17 | 62 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v+++G+++W++I ++ + Rt+k+c++rw + Oeu020087.1 17 KGPWKAEEDEVLINHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 62 79*************************8887799**********87 PP | |||||||
2 | Myb_DNA-binding | 46.8 | 6.8e-15 | 73 | 112 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w Oeu020087.1 73 KFSAEEERTVIDLQAQFGNK-WAKIATYLP-GRTDNDVKNFW 112 79******************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDGRKRMLCD DMGAIKKGPW KAEEDEVLIN HVNKYGPRDW SSIRSKGLLQ RTGKSCRLRW 60 VNKLRPNLKN GVKFSAEEER TVIDLQAQFG NKWAKIATYL PGRTDNDVKN FWSSRQKRLA 120 RILQTSAPPC GSKPRKNKEI QVPPLLDGVP SLEVIKISFI LTNLWLIPFL AFQDRSVGHP 180 IFPFSHHKL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 1e-71 | MYB family protein |